diff --git a/cms/envs/acceptance.py b/cms/envs/acceptance.py
index da015be00e..fa59fc9ad1 100644
--- a/cms/envs/acceptance.py
+++ b/cms/envs/acceptance.py
@@ -19,12 +19,21 @@ import logging
 logging.basicConfig(filename=TEST_ROOT / "log" / "cms_acceptance.log", level=logging.ERROR)
 
 import os
-from random import choice, randint
 
 
 def seed():
     return os.getppid()
 
+# Suppress error message "Cannot determine primary key of logged in user"
+# from track.middleware that gets triggered when using an auto_auth workflow
+# This is an ERROR level warning so we need to set the threshold at CRITICAL
+logging.getLogger('track.middleware').setLevel(logging.CRITICAL)
+
+# Suppress warning message "Cannot find corresponding link for name: <foo>"
+# from edxmako.shortcuts. We have no appropriate pages in the platform to
+# use, so these are not set up for TOS and PRIVACY
+logging.getLogger('edxmako.shortcuts').setLevel(logging.ERROR)
+
 DOC_STORE_CONFIG = {
     'host': 'localhost',
     'db': 'acceptance_xmodule',
diff --git a/lms/envs/acceptance.py b/lms/envs/acceptance.py
index 8582ced3e1..3a8eff9edb 100644
--- a/lms/envs/acceptance.py
+++ b/lms/envs/acceptance.py
@@ -27,6 +27,11 @@ import string
 def seed():
     return os.getppid()
 
+# Suppress error message "Cannot determine primary key of logged in user"
+# from track.middleware that gets triggered when using an auto_auth workflow
+# This is an ERROR level warning so we need to set the threshold at CRITICAL
+logging.getLogger('track.middleware').setLevel(logging.CRITICAL)
+
 # Use the mongo store for acceptance tests
 DOC_STORE_CONFIG = {
     'host': 'localhost',